| TestCasesAnnotate |
Annotate test case
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| TestCasesAnnotateCreateIndex |
Annotate test case
Deletes index files to make sure they are properly built
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| TestCasesAnnotateMem |
Annotate test case
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| TestCasesAnnotateTabix |
Annotate test case using TABIX indexed files
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| TestCasesAnnotateUseIndex |
Annotate test case
Uses the index files created during the execution of TestCasesAnnotateCreateIndex test suite
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| TestCasesCaseControl |
Case control test cases
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| TestCasesConcordance |
Concordance test cases
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| TestCasesDbNsfp |
Test cases for dbNSFP database annotations
Note: This class tries to use 'data type cache' files
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| TestCasesDbNsfpDeleteCache |
Test cases for dbNSFP database annotations
Note: This class deletes and re-builds 'data type cache' files
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| TestCasesExtractFields |
Extract fields test cases
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| TestCasesFilter |
Filter test cases
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| TestCasesFilterALL |
Filter test cases for 'ALL' index
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| TestCasesFilterChrPos |
Test cases for SnpSift filterChrPos
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| TestCasesFilterGt |
Filter test cases for 'GT Filter'
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| TestCasesGeneSets |
SnpSift 'gt' test cases
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| TestCasesGt |
SnpSift 'gt' test cases
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| TestCasesGwasCatalog |
Test GWAS catalog classes
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| TestCasesHwe |
HWE test cases
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| TestCasesIndex |
Annotate test case
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| TestCasesIntervals |
SnpSIft intervals
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| TestCasesLd |
Linkage disequilibrium test cases
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| TestCasesPrivate |
SnpSift 'private' test cases
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| TestCasesSort |
SnpSift 'split' test cases
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| TestCasesSplit |
SnpSift 'split' test cases
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| TestCasesVarType |
VarType test cases
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| TestCasesVcfCheck |
VarType test cases
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