Package org.snpsift.lang.expression

Class Expression

    • Field Summary

      Fields 
      Modifier and Type Field Description
      static boolean debug  
      protected boolean negated  
      protected java.lang.String operator  

    • Constructor Summary

      Constructors 
      Constructor Description
      Expression()  
      Expression​(java.lang.String operator)  

    • Method Summary

      All Methods Instance Methods Abstract Methods Concrete Methods 
      Modifier and Type Method Description
      abstract Value eval​(org.snpeff.vcf.VcfEntry vcfEntry)
      Evaluate expression using VcfEntry
      abstract Value eval​(org.snpeff.vcf.VcfGenotype vcfGenotype)
      Evaluate expression using genotype
      void setNegated​(boolean negated)  

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    • Field Detail

      • debug

        public static boolean debug

      • negated

        protected boolean negated

      • operator

        protected java.lang.String operator

    • Constructor Detail

      • Expression

        public Expression()

      • Expression

        public Expression​(java.lang.String operator)

    • Method Detail

      • eval

        public abstract Value eval​(org.snpeff.vcf.VcfEntry vcfEntry)
        Evaluate expression using VcfEntry

      • eval

        public abstract Value eval​(org.snpeff.vcf.VcfGenotype vcfGenotype)
        Evaluate expression using genotype

      • setNegated

        public void setNegated​(boolean negated)