Package org.snpeff.vcf

Class VcfConsequenceHeader

java.lang.Object

org.snpeff.vcf.VcfConsequenceHeader

public class VcfConsequenceHeader
extends java.lang.Object

An 'CSQ' entry in a vcf header line

Author:

pablocingolani

Constructor Summary

Constructors

Constructor	Description
VcfConsequenceHeader(VcfFileIterator vcf)

Method Summary

Modifier and Type	Method	Description
java.lang.String[]	getFieldNames()
java.lang.Integer	getFieldNum(java.lang.String fieldName)
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

VcfConsequenceHeader

public VcfConsequenceHeader(VcfFileIterator vcf)

Method Detail

getFieldNames

public java.lang.String[] getFieldNames()

getFieldNum

public java.lang.Integer getFieldNum(java.lang.String fieldName)

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object