Package org.snpeff.snpEffect.testCases.integration

Class TestCasesIntegrationGenomicSequences

  • public class TestCasesIntegrationGenomicSequences
extends java.lang.Object
    Test case for genomic sequences

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void test_01()
      Check that we can recover sequences from all exons using GneomicSequence class
      void test_02()
      Check that we can recover sequences from all exons using GenomicSequences class, WITHOUT loading sequence form databases

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    • Constructor Detail

      • TestCasesIntegrationGenomicSequences

        public TestCasesIntegrationGenomicSequences()

    • Method Detail

      • test_01

        @Test
public void test_01()
        Check that we can recover sequences from all exons using GneomicSequence class

      • test_02

        @Test
public void test_02()
        Check that we can recover sequences from all exons using GenomicSequences class, WITHOUT loading sequence form databases