ReSampleInt (SnpEff 5.1 API)

java.lang.Object
- org.snpeff.probablility.bootstrap.ReSampleInt

Direct Known Subclasses:

ReSampleMap, ReSampleMapRank
```
public class ReSampleInt
extends java.lang.Object
```
Re-sample statistic Statistic is a sum of a set of integer numbers (e.g. ranks). The statistic is sampled and PDF/CDF can be calculated from empirical random re-sampling.

Author:

pablocingolani

Constructor Summary

Constructors
Constructor Description

ReSampleInt(int[] scores, int sampleSize)

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`double`	`cdf(int number)`	Cummulative distribution for this number
`protected void`	`clearStats()`	Clear previous statistics
`protected int`	`evaluate()`	Random sample and evaluate
`int`	`max()`
`int`	`min()`
`int`	`quantile(double quantile)`	Smallest number whose CDF is larger than a given quantile.
`void`	`resample(int iterations)`	Re-sample 'iterations' times
`void`	`setVerbose(boolean verbose)`
`java.lang.String`	`toString()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - ReSampleInt
```
public ReSampleInt(int[] scores,
                   int sampleSize)
```
- Method Detail
  - cdf
```
public double cdf(int number)
```
    Cummulative distribution for this number
    
    Parameters:
    
    number -
    
    Returns:
  - clearStats
```
protected void clearStats()
```
    Clear previous statistics
  - evaluate
```
protected int evaluate()
```
    Random sample and evaluate
  - max
```
public int max()
```
  - min
```
public int min()
```
  - quantile
```
public int quantile(double quantile)
```
    Smallest number whose CDF is larger than a given quantile. I.e. x such that P[ X <= x ] >= Quantile
    
    Parameters:
    
    quantile -
    
    Returns:
  - resample
```
public void resample(int iterations)
```
    Re-sample 'iterations' times
    
    Parameters:
    
    iterations -
  - setVerbose
```
public void setVerbose(boolean verbose)
```
  - toString
```
public java.lang.String toString()
```
    Overrides:
    
    toString in class java.lang.Object