| CodonChange |
Analyze codon changes based on a variant and a Transcript
|
| CodonChangeDel |
Calculate codon changes produced by a deletion
|
| CodonChangeDup |
Calculate codon changes produced by a duplication
|
| CodonChangeIns |
Calculate codon changes produced by an insertion
|
| CodonChangeInterval |
Calculate codon changes produced by a Interval
Note: An interval does not produce any effect.
|
| CodonChangeInv |
Calculate codon changes produced by an inversion
|
| CodonChangeMixed |
Calculate codon changes produced by a 'mixed' variant
Essentially every 'mixed' variant can be represented as a concatenation of a SNP/MNP + an INS/DEL
|
| CodonChangeMnp |
Calculate codon changes produced by a MNP
|
| CodonChangeSnp |
Calculate codon changes produced by a SNP
|
| CodonChangeStructural |
Calculate codon changes produced by a duplication
|