Uses of Class
org.snpeff.interval.Cds

Packages that use Cds

Package	Description
org.snpeff.interval
org.snpeff.snpEffect.factory
org.snpeff.svg
org.snpeff.vcf

Uses of Cds in org.snpeff.interval

Methods in org.snpeff.interval that return Cds

Modifier and Type	Method	Description
Cds	Cds.cloneShallow()
Cds	Transcript.findCds(Exon exon)	Find a CDS that matches exactly the exon

Methods in org.snpeff.interval that return types with arguments of type Cds

Modifier and Type	Method	Description
java.util.List<Cds>	Transcript.getCds()	Get all CDSs

Methods in org.snpeff.interval with parameters of type Cds

Modifier and Type	Method	Description
void	Transcript.add(Cds cdsInt)	Add a CDS

Uses of Cds in org.snpeff.snpEffect.factory

Methods in org.snpeff.snpEffect.factory with parameters of type Cds

Modifier and Type	Method	Description
protected void	SnpEffPredictorFactory.add(Cds cds)

Uses of Cds in org.snpeff.svg

Constructors in org.snpeff.svg with parameters of type Cds

Constructor	Description
SvgCds(Cds cds, Svg svg)

Uses of Cds in org.snpeff.vcf

Methods in org.snpeff.vcf that return Cds

Modifier and Type	Method	Description
Cds	VcfEntry.cloneShallow()