CytoBands (SnpEff 5.1 API)

java.lang.Object
- org.snpeff.interval.CytoBands

```
public class CytoBands
extends java.lang.Object
```
Cytband definitions E.g.: http://hgdownload.soe.ucsc.edu/goldenPath/hg38/database/cytoBand.txt.gz

Author:

pcingola

Field Summary

Fields
Modifier and Type Field Description

static java.lang.String DEFAULT_CYTOBAND_BED_FILE

Constructor Summary

Constructors
Constructor Description

CytoBands(Genome genome)

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`add(Marker m)`
`void`	`build()`
`boolean`	`isEmpty()`
`Markers`	`query(Marker marker)`
`java.lang.String`	`toString()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail
- DEFAULT_CYTOBAND_BED_FILE
```
public static final java.lang.String DEFAULT_CYTOBAND_BED_FILE
```
  See Also:
  
  Constant Field Values

Constructor Detail
- CytoBands
```
public CytoBands(Genome genome)
```

Method Detail

add
```
public void add(Marker m)
```

build
```
public void build()
```

isEmpty
```
public boolean isEmpty()
```

query

public Markers query(Marker marker)

toString
```
public java.lang.String toString()
```
Overrides:

toString in class java.lang.Object