Uses of Class
com.actelion.research.chem.alignment3d.transformation.TransformationSequence
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Uses of TransformationSequence in com.actelion.research.chem.alignment3d
Methods in com.actelion.research.chem.alignment3d that return TransformationSequence Modifier and Type Method Description TransformationSequencePheSAAlignmentOptimizer.AlignmentResult. getTransform()Constructors in com.actelion.research.chem.alignment3d with parameters of type TransformationSequence Constructor Description AlignmentResult(double similarity, TransformationSequence transformation, int refConformerIndex, int conformerIndex) -
Uses of TransformationSequence in com.actelion.research.chem.alignment3d.transformation
Methods in com.actelion.research.chem.alignment3d.transformation that return TransformationSequence Modifier and Type Method Description static TransformationSequenceTransformationSequence. decode(java.lang.String s) -
Uses of TransformationSequence in com.actelion.research.chem.docking.receptorpharmacophore
Methods in com.actelion.research.chem.docking.receptorpharmacophore with parameters of type TransformationSequence Modifier and Type Method Description static ShapeVolumeNegativeReceptorImageCreator. create(StereoMolecule lig, StereoMolecule rec, TransformationSequence transformation) -
Uses of TransformationSequence in com.actelion.research.chem.phesa
Methods in com.actelion.research.chem.phesa with parameters of type TransformationSequence Modifier and Type Method Description double[]PheSAAlignment. findAlignment(double[][] initialTransforms, TransformationSequence optimizedTransform)double[]PheSAAlignment. findAlignment(double[][] initialTransforms, TransformationSequence optimizedTransform, boolean optimize)double[]PheSAAlignment. findAlignment(double[][] initialTransforms, TransformationSequence optimizedTransform, boolean optimize, boolean tversky) -
Uses of TransformationSequence in com.actelion.research.chem.phesa.pharmacophore
Methods in com.actelion.research.chem.phesa.pharmacophore with parameters of type TransformationSequence Modifier and Type Method Description doublePPTriangle. getMatchingTransform(PPTriangle fitTriangle, TransformationSequence transform, boolean useDirectionality)
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